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ezPaycheck is very flexible. Please use the MISC check to pay the non-taxable payment.

https://www.halfpricesof...aycheck_vendor_check.asp 

Please feel free to contact us if you still have any questions.

Thank you,
If you have further questions, please contact us directly at services@halfpricesoft.com
Small business payroll & tax software solution
http://www.halfpricesoft.com 
I add mileage and reimbursement to the Check, but every time I run the payroll they are considers taxable income, how do I add them as Non taxable income ?

Thank you